Browse of TCMCG005C09240 protein

CDS

Accession Number	TCMCG005C09240
gbkey	CDS
Protein Id	XP_020257148.1
Location	join(35048913..35048936,35054559..35054632,35054733..35054872,35054955..35055041,35055175..35055262,35055335..35055418,35057977..35058054,35058200..35058282,35059391..35059469,35059707..35060036,35060102..35060188,35061132..35061378,35061559..35061783,35062600..35063943,35064371..35064620,35064699..35064834,35064939..35065023,35065265..35065343,35066970..35067265,35067563..35068640,35068745..35069116,35069546..35070201)
Gene	LOC109833757
GeneID	109833757
Organism	Asparagus officinalis

Protein

Length	1973aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020401559.1
Definition	mediator of RNA polymerase II transcription subunit 13

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATGTCTTCAGAATCGGAGAACTCCAAGTTGTTTCATGGTTTCAATTTCTCCCTTATGAATCTGATCCAAACCCTCTTCCAGAGAAAAGTTTGAAATCCGAACAGAAAGATGCTGCTACTTATTTGGTGCTTTCAGCACATCTGCAGTTGCAGAACAATGGATTTCTCAGCACGTGGACCAACTCTTTTGTTGGTCCATGGGATCCATCTCAGGGCATACACAACCCTGATGAGAAAATTAAGCTTTGGCTTTTTCTTCCTGGACGGCACTCTTCAATAGATGAGTCTGCTCAAGCTGCAGTATCAAAATTGAGAGTTATTGGTACTGGACTCTGGTTAGCCCCTGGAGACTCCGAGGAGGTTGCTGTTGCTTTATCTCAGGCATTGAGAAATTCATTGGAAAGATCATTAAGAGGACTATCCTATGTGAGATTTGGGGACGTTTTCACCAAATGCCACTCATTTGCATCAAACACACAAAACTTCAGGAGAGTGCAACCGACGATTGAGTTTATCTTTTCTGTGAATGAAGAAGCAATCTACGTGCATGCAATAATATCTGCAAAGCATGTTCGGGGACTTTGCAGCGATGACATGGAAAGGGTATCAAAGCATCGTTCCTCTAATTCCACTGGGGAAGGTCTTCCAGTCATTGTTGCCCCTAATGGCATGCGAGGAAGACTTACAGGATGTTGTCCAAGTGACCTGGTGAAGCATGTGTATATCAGCAAGAACAAGGCTTCAAAAGGGTTAATTGGGGGAATGCCTTTTGATGTCGCTCAATCTTCAGGCTGCCAGCTAAGAGGTCAGAGTTGCTTTGTTGAAATTACTCTGGGTTGCTCCTCTAAATGCAGTAGCAAAACTTTGGAGTCAGGCGTTAACCAAAATAAGAACACCATCCATCATGGAGAGGTACAAATGAAGCCTGTTGGAAGAAGTCAGCAGAAGCAGGGATCAGAAGATCAACTTGCAATTCTTCAAAGAACATTCATTTACCAACCAGAAACTGTGCTGGTTCCTTTAATGCACAAGGCGTTTGCTAGAACTTCCCTCAAGAGGTTTTGTCGGAAAAATTGGTCCCAAAAATCATTAACTGAGCTGTGGCCATTATGGGGTTTTTCGTATTCATCACATATTGAACATTGCTTGGCATTTGGAAGCACTTGCAATGATGTTATTGATGGACTTGAAGTTGATAATATGCGACTGCAGCGCCGACTTAATAGCAACAGCAACAGTAGTAGTATCAGCAGTGTAAGTAGCACTTCAAGTGAATCTGATAATGTGATGGCTATTGATGGTGATGATCTTGAAGCAGATGCTGATTCTCATGGCTCTAAAAGGGCTGCTTTATTGTCCAATGAACAACTCGAGAATGATGGCAGTAGAATGGTTAAGCGTCCTCGGACAGGCACAGATGCACTTGGTCAGACTGCAGGCGTACTTGTGCAGGATGCAAATAATTCAGCTTCTGCAGGACTGATAAATTTTGAATCTCAATGGGATTGGGACGATGATGATGACGAGAAAGGCTTTGGCTTGGATATCCAAATAATACTTTCCGAATTTGGAGATTTTGGTGATTTCTTTGAAAATGATGTTCTATCATTTGGTGAGCCTCCTGGAACAGCTGAATCTCAAGTCCTCATGTTGCCTGCCCCTGATTGTGAAGATGTCAGTGCAAGTCCTTGCACTGGAGGAATGGATGTTGATCAGAAACTTTCGCCTGTTGCTCTGACTTCTTTTGAGGGAGTTCATCTTCCACGTTTGGCGCTTACGGAAAATACTCAAAGCAAAAATACAGAATCTACAAGGGATTCAAGATCACTTGCAGAAAACCATTTCTTGCCACCCTCTATGGGTAAGTTTGATTATCTCACAAAGGCTGAAGCGATGATGTCATTTGCACCTGAATATGCAGCCGTTGAGACTCCTGTTAGTGAGTTTTCAACATCAATTTTTAAAAGTCCATACTTACCCCGATCTAAAAGGGTCGAAAGTCTGCAGTCAAGCACAAGTGCTTATGTGTACGGCATTACACCATCTTCTTCTTGTGTGGAGACATCAGAGGAAAAACTGGAAACAACAGGCAAAGTGGGTTCTGCAGGACATGATACAAATTCCTCTGCAAGATCATCGAAATTATATGATCTTGTTCAAGTCGGGAGAAAAAAGAACGACAGTAAATCAACCAACAATGACATATCTTTACTTAAAGGAGATGCATCTTCTCTGTCTGGCATCAATTCGTCAACCACGACCTTCACTCTTCAAAGGAAGAACGAACAAACATTTGAGGCGGGACATCTTTTACTGCCCGTAAAGACTGTACTTGCTACAGAAATTGAATGCATCATGTTTCAAGCTGCCATGTGTCGGATAAGACACACATTACTTTCACTGAACAATCATTTACCTTTTGGATTGAGTAATGTAGCTGGAAATGTTATGCCAGAATCCTGTATTACTCGGACACCTTCTGATATGGTGCCTAATAAGTATGATATGAAGAAGAAAGATTCTTTACCTGTCAGAATAGCTGGTGAATTTGACGGAGGAATTTTTGAAGAACCTCTCACCGCACAGGTGGGTGTTTGGCGCTCTGTTGGGGTTCCTAAAGTAACAAAGTCTTCAAATATGCGAATTTCAGAAAATTCATCTTCATTGGCTGGTAATATGCTGACTGATGATGGTTTAAGTTTCTCTGGGCAAAGACAACCTCTTCAGGAGCTTCTGGATGCGATGGTCTTGCTAGTTCAACAATCTACTTCCTTTGTGGATATTTCACTGGATATGGATGACAGTGAGAGTTCCTACTATTTGCTTGCGTTACAGGAACAAGGAAGGCGTGGGTTTTCTTGTGGTCCTTCTATGGTTCATGCAGGTTGTGGTGGACTTTTGGCCACATGTCACTATATGGACATTGCTGGTATTGACTTGATAGATCCGCTCTCTGCTGATGTTCCACCATCATCTGTTATTAGTTTGCTGCAGTCAGACATTAAGGTTGCCATGAAATCTGCTTTCGGAAATCCAGATGGCCCGTTAACAGTGTTTGATTGGTGTAAAGGACGAAGCCAATCGATCGACTCAGGAGCTTCTGGAGATGGATATTCTTATGTTAGTGAAACTAAGGACTCCTCTGGTAATCTTACTATTGTTGGAGATTCAATAAGTCCTCAATCAATTGGTGGTTCATCTTGTATTAGAGAGGGGCCGAGAATGGATGAATCATCTCAAAGACGATTAAGCCAAGAGATGGGCAATTCAGAGTCAGAACAGCAAAAGGGCTATTCTTGTGGTAGGCCAACAGTTGCGGTGTTGCCATTGCCTTCTATACTTGTTGGGTACCAGGATGATTGGCTGAAGACATCTCCTAACTGTCTTGAATTCTGGGAAAAAGGTCTAGAACCTTATGCTTTGCAGAAGTCAGTTACTTACTGTGCTGTTTGTCCGGATATTAATCTGCTTACTTCAGCTGCTGCTGATTTTTTTCAACAGTTAGGAACGGTTTATGAGGCCTGCAGACTAGGAACTCATTCACCTTTGGTCAATGGAAGCCAGATGGAACTATCCCCTGGAAAGGGTCCATCTTCTGGCCTAGTTCTTGTTGACTGTCCCCAGCAAGTGAAGGTTGCAGGAAATAATCTATTTTCTATCAGTTCAATAAGTGACTACTTTCTGGCGTTATCCAAAAGTTGGAGTGTGGATAAATTCATTAGTGCTCTTGGAAAGGTTATCAGGGATCTAAAACTCACTACAAGTTCTTCCCAGAATCAGAAGGAGGGGAGTGCAGGTCCATGCACTGTAGTATATGTTGTATGCCCTTTCCCTGATTCTACAGCTGTTCTGAGAACTCTGATCGAGTCCTCTGCTGCCATAGGATCAGTTGTCCTGTCTCCAGATAGAGAGAGACAATCCTGGTTACTCTCTCAAGTTGCGAGAGCTCAAAGTTGTCCGGCTGCTGCCGATGAAGTAACATCAAATGTTGTAATGCTCTCAGGATTCAGCATTCCAAAACTTGTTTTGCAGATTGTGACTGTCGATTGCTTACTAAGAGTCAATAGGCCAGTGAGTGAGCTTACGGTCTTGAAAGATATTGCTTTCACTGTGTACAACAAGGCTCGTCGAGTATCACGGCCTATTCCTAGCAATGACATGTTTCGGACATTATCTGCGTCAGGGAGACAACAAGCTTCATTGATGCATGCGGCTTCTCCAATTCAAGGCATGTGGAAGGATTGCCTTGCTCCTCGAATGTCTGGATCCTCTCTTTCTAGAGAAGGTGAGCTTGATGCTGCCTTGAGGCCTGGTGCTTGGGATAACTCATGGCAGGCATCAAGGACAGGACTTGATTCAAATAGATCAGCGGATTTGCATTTTCAAGATGAGACAAGATGCATGTTTGAACCACTATTTATACTGGCAGAACCTGGTTCTTTGGAGCGTGGCTCGTCTGTGAGCGTGTTAGGAAGTGCATCACTAGAATCTTCTAGTTCAAAATCTGGTATTGATGATAGTAGTGGAATTTATATGCAAAATTCCAATTCAGGAAGGAATTCAGAGGTTGGAACAAATTCATTGCTCGACATAGCAGACCATGATCAAAAATTAGCCAGCCTTCACTGTTGTTATGGGTGGACTGAGGACTGGCGGTGGCTTGCCTGCATATGGACAGACTCTAGAGGAGAGTTGCTTGATTGTAATATATTTCCATTTGGTGGTATTAGTAGCTGCCAAGATACAAAGGTTCTCCAAAGCCTGTTTGTTCAAGTTTTACACCAAGGTTGTCAAATATTATCCAGTTCTCCTGATTCTGGCTCTGTTAAGGCAAGGGACATAATTATTACACGTATTGGAGGTTTCTTTGAGTTAGAATGCCAAGAATGGCAGAACGCTATATATTCAGTTGGAGGAAATGATGTTAAGAAGTGGCCCCTGCAACTAAGGCGATCTACCCTCAACATTCTCTCCTCGAGTACTAATGGAACTTCTCTTCAGCAACATGAAATGGGTTTAATACAAGAAAGAAATCTTCCTCCCTCACCTAGCTCTTCTTTATACAGCCCTCGTGCAAAAACAAGCTATATGAAAAGTGGTCTAGGCCAGGGTAATACCAAAAAACAACTACTGGCAGGACAGACTGGGGCTGACAATTCAAGAGGACTTCTACAGTTGGTTCAGAGCATCAGTTTAGTTGGAGTTTCTATTGATCATTCTTTGTACCTAATGCTTCCAGCTGATTCTTCTTCCTCTGGCACTGGAACTCAAAACAGTAGCAGTGGTTCAACTTTCTCTGGATATGTCGAAGGCTTCAGCCCTGTGAAGTCTGTAGGATCAATGCCAGCCTCATATATCGTAATCCCTTCACCAAATATGCGCTCTCTATCTCCAACACCCTTGCAACTTCCCACTTGCCTCACCTCTGAATCTCCACCCCTTGCACATCTTTTACACAGCAAAGGCTCTGCAATTCCTCTCTCAACAGGATACATCGTGTCAAAAGCAGTCCCTACCATGAGAAAAGATCCTGCTGAGCCAGTGAAAGATGATTGGCCTTCTGTTCTTTCTGTCACCCTCATTGATCACTATGGGGGTAACAACAGTAGCAGTAGCAGTAACAGTAGTATACAAGACAAAGTTGGTCGAGGTGGCAGTAAACAAGGAAGGGGTGTTAGTATAGGGCCTGAGGCCATAAGCAATAGAGATTATGAATTGGAGACTCATTTGGTTTTGCAGTCAGTGGCTGCTGAGCTTCAAGCTCTTTCATGGATGACAGTAAGTCCAGTGTATTTGGAGAGACGAAGTGCTTTGCCTTTTCATTGTGATATGATTCTAAGACTTCGAAGACTTCTGCATTATGCGGATAAAGAGTTGTCGAGACCTCCAGATAGAGCACAAGGGGTCTCCTGA

Protein:   MWTNVFRIGELQVVSWFQFLPYESDPNPLPEKSLKSEQKDAATYLVLSAHLQLQNNGFLSTWTNSFVGPWDPSQGIHNPDEKIKLWLFLPGRHSSIDESAQAAVSKLRVIGTGLWLAPGDSEEVAVALSQALRNSLERSLRGLSYVRFGDVFTKCHSFASNTQNFRRVQPTIEFIFSVNEEAIYVHAIISAKHVRGLCSDDMERVSKHRSSNSTGEGLPVIVAPNGMRGRLTGCCPSDLVKHVYISKNKASKGLIGGMPFDVAQSSGCQLRGQSCFVEITLGCSSKCSSKTLESGVNQNKNTIHHGEVQMKPVGRSQQKQGSEDQLAILQRTFIYQPETVLVPLMHKAFARTSLKRFCRKNWSQKSLTELWPLWGFSYSSHIEHCLAFGSTCNDVIDGLEVDNMRLQRRLNSNSNSSSISSVSSTSSESDNVMAIDGDDLEADADSHGSKRAALLSNEQLENDGSRMVKRPRTGTDALGQTAGVLVQDANNSASAGLINFESQWDWDDDDDEKGFGLDIQIILSEFGDFGDFFENDVLSFGEPPGTAESQVLMLPAPDCEDVSASPCTGGMDVDQKLSPVALTSFEGVHLPRLALTENTQSKNTESTRDSRSLAENHFLPPSMGKFDYLTKAEAMMSFAPEYAAVETPVSEFSTSIFKSPYLPRSKRVESLQSSTSAYVYGITPSSSCVETSEEKLETTGKVGSAGHDTNSSARSSKLYDLVQVGRKKNDSKSTNNDISLLKGDASSLSGINSSTTTFTLQRKNEQTFEAGHLLLPVKTVLATEIECIMFQAAMCRIRHTLLSLNNHLPFGLSNVAGNVMPESCITRTPSDMVPNKYDMKKKDSLPVRIAGEFDGGIFEEPLTAQVGVWRSVGVPKVTKSSNMRISENSSSLAGNMLTDDGLSFSGQRQPLQELLDAMVLLVQQSTSFVDISLDMDDSESSYYLLALQEQGRRGFSCGPSMVHAGCGGLLATCHYMDIAGIDLIDPLSADVPPSSVISLLQSDIKVAMKSAFGNPDGPLTVFDWCKGRSQSIDSGASGDGYSYVSETKDSSGNLTIVGDSISPQSIGGSSCIREGPRMDESSQRRLSQEMGNSESEQQKGYSCGRPTVAVLPLPSILVGYQDDWLKTSPNCLEFWEKGLEPYALQKSVTYCAVCPDINLLTSAAADFFQQLGTVYEACRLGTHSPLVNGSQMELSPGKGPSSGLVLVDCPQQVKVAGNNLFSISSISDYFLALSKSWSVDKFISALGKVIRDLKLTTSSSQNQKEGSAGPCTVVYVVCPFPDSTAVLRTLIESSAAIGSVVLSPDRERQSWLLSQVARAQSCPAAADEVTSNVVMLSGFSIPKLVLQIVTVDCLLRVNRPVSELTVLKDIAFTVYNKARRVSRPIPSNDMFRTLSASGRQQASLMHAASPIQGMWKDCLAPRMSGSSLSREGELDAALRPGAWDNSWQASRTGLDSNRSADLHFQDETRCMFEPLFILAEPGSLERGSSVSVLGSASLESSSSKSGIDDSSGIYMQNSNSGRNSEVGTNSLLDIADHDQKLASLHCCYGWTEDWRWLACIWTDSRGELLDCNIFPFGGISSCQDTKVLQSLFVQVLHQGCQILSSSPDSGSVKARDIIITRIGGFFELECQEWQNAIYSVGGNDVKKWPLQLRRSTLNILSSSTNGTSLQQHEMGLIQERNLPPSPSSSLYSPRAKTSYMKSGLGQGNTKKQLLAGQTGADNSRGLLQLVQSISLVGVSIDHSLYLMLPADSSSSGTGTQNSSSGSTFSGYVEGFSPVKSVGSMPASYIVIPSPNMRSLSPTPLQLPTCLTSESPPLAHLLHSKGSAIPLSTGYIVSKAVPTMRKDPAEPVKDDWPSVLSVTLIDHYGGNNSSSSSNSSIQDKVGRGGSKQGRGVSIGPEAISNRDYELETHLVLQSVAAELQALSWMTVSPVYLERRSALPFHCDMILRLRRLLHYADKELSRPPDRAQGVS